Hi again JJ,

Thanks again for agreeing that we (the IUC) can adopt your
GMAP wrappers under the MIT license.

Apologies for the extra question, but are you happy for the
GMAP datatypes originally defined in your ToolShed repository
https://toolshed.g2.bx.psu.edu/view/jjohnson/gmap/ to be
moved into the Galaxy core, under Galaxy's open source
licence: Academic Free License version 3.0
https://github.com/galaxyproject/galaxy/blob/dev/LICENSE.txt

Thanks,

Peter

On Tue, Sep 20, 2016 at 2:51 PM, Peter Cock <p.j.a.c...@googlemail.com> wrote:
> Thanks JJ,
>
> That's great. We're hoping to use GMAP locally, so I have an incentive
> to tackle this and the dependency glitch with the current versions on
> the Tool Shed.
>
> Cheers,
>
> Peter
>
> On Tue, Sep 20, 2016 at 2:50 PM, Jim Johnson <johns...@umn.edu> wrote:
>> I would greatly appreciate the IUC adopting all gmap/gsnap work that I
>> originally worked on.
>> I do not currently have the time to maintain these tools.
>>
>> Administrative access granted to IUC for:
>>
>>         https://toolshed.g2.bx.psu.edu/view/jjohnson/gmap/
>>
>> https://toolshed.g2.bx.psu.edu/view/jjohnson/package_gmap_2013_05_09/
>>         https://testtoolshed.g2.bx.psu.edu/view/jjohnson/gmap/
>>
>> https://testtoolshed.g2.bx.psu.edu/view/jjohnson/package_gmap_2013_05_09/
>>
>> These can be copied to the iuc owned repositories and I could deprecate
>> those under my name.
>>
>>
>>
>> On 9/20/16 8:13 AM, Peter Cock wrote:
>>>
>>> Thanks JJ :)
>>>
>>> Could you explicitly confirm that we (the IUC) have your permission
>>> to adopt the gmap wrappers and packages (and any of your other
>>> Galaxy work you might want to suggest), to develop and maintain
>>> under the IUC banner, under the MIT license.
>>>
>>> (Ideally I'd suggest you state this in an email CC'ing the galaxy-dev
>>> list as a public record)
>>>
>>> For now this will mean tracking their development in:
>>> https://github.com/galaxyproject/tools-iuc
>>>
>>> Secondly, would you be willing to grant admin/write access
>>> to the IUC account on the (main and test) tool shed for these:
>>>
>>> https://toolshed.g2.bx.psu.edu/view/jjohnson/gmap/
>>> https://toolshed.g2.bx.psu.edu/view/jjohnson/package_gmap_2013_05_09/
>>>
>>> Thanks,
>>>
>>> Peter
>>>
>>> On Tue, Sep 20, 2016 at 12:47 PM, Jim Johnson <johns...@umn.edu> wrote:
>>>>
>>>> It would be great to move this to IUC.
>>>> I originally put a lot of effort into this for a researcher at MN; I
>>>> think
>>>> it was tried once.
>>>> I now use gmap as part a dependency of the deFuse application.
>>>> Thanks,
>>>> JJ
>>
>>
>>
>> --
>> James E. Johnson Minnesota Supercomputing Institute University of Minnesota
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