Hello Bjoern
Thanks for confirming. Is it right that conda dependency resolution is
not supported pre Galaxy v16.01?
Best wishes
Peter
On 15/12/16 10:45, Björn Grüning wrote:
Hi Peter,
Am 15.12.2016 um 11:28 schrieb Peter Briggs:
Dear developers
It looks like some updates to 'devteam'-maintained toolshed tools have
dropped support for tool_dependencies.xml (e.g. fastqc, freebayes), so
their dependencies cannot be automatically installed from the toolshed.
Is this correct? I assume that it's part of the move to enforcing conda
dependency resolution.
Yes. We really hope we are ready to go for conda, John and Marius have
improved the conda support dramatically in the last months.
Thanks,
Bjoern
Best wishes
Peter
--
Peter Briggs peter.bri...@manchester.ac.uk
Bioinformatics Core Facility University of Manchester
B.1083 Michael Smith Bldg Tel: (0161) 2751482
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