Hi Sam,
thanks for the answer. So far I have not configured anything, I was
hoping that it works out of the box :).
Could you point me to some documentation where the setup is explained?
Best,
Matthias
On 25.08.2017 19:05, Aysam Guerler wrote:
Hi Matthias,
Have you added the visulization to Charts or the regular Galaxy
visualization framework? If it is the latter please make sure that you
correctly specified the datatype in your XML file. Your visualization
should than appear in the drop-down list in the history.
Thanks,
Sam
On Fri, Aug 25, 2017 at 5:25 AM, Matthias Bernt <[email protected]
<mailto:[email protected]>> wrote:
Dear list,
I can not get the wonderful unipept visualization to work on our
Galaxy instance (a test instance on the dev branch). I get the message:
"Unfortunately we could not identify a suitable plugin...."
The file I try to visualize was generated by unipept (pept2lca) and
is of format d3_hierarchy.
Could someone tell me if I need to install / configure something to
get this running?
Thanks a lot.
Best,
Matthias
P.S. This might be also of interest for others, since this
visualization is used in the Metaproteomics tutorial of the GTN.
--
-------------------------------------------
Matthias Bernt
Bioinformatics Service
Molekulare Systembiologie (MOLSYB)
Helmholtz-Zentrum für Umweltforschung GmbH - UFZ/
Helmholtz Centre for Environmental Research GmbH - UFZ
Permoserstraße 15, 04318 Leipzig, Germany
Phone +49 341 235 482296 <tel:%2B49%20341%20235%20482296>,
[email protected] <mailto:[email protected]>, www.ufz.de <http://www.ufz.de>
Sitz der Gesellschaft/Registered Office: Leipzig
Registergericht/Registration Office: Amtsgericht Leipzig
Handelsregister Nr./Trade Register Nr.: B 4703
Vorsitzender des Aufsichtsrats/Chairman of the Supervisory Board:
MinDirig Wilfried Kraus
Wissenschaftlicher Geschäftsführer/Scientific Managing Director:
Prof. Dr. Dr. h.c. Georg Teutsch
Administrative Geschäftsführerin/ Administrative Managing Director:
Prof. Dr. Heike Graßmann
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--
-------------------------------------------
Matthias Bernt
Bioinformatics Service
Molekulare Systembiologie (MOLSYB)
Helmholtz-Zentrum für Umweltforschung GmbH - UFZ/
Helmholtz Centre for Environmental Research GmbH - UFZ
Permoserstraße 15, 04318 Leipzig, Germany
Phone +49 341 235 482296,
[email protected], www.ufz.de
Sitz der Gesellschaft/Registered Office: Leipzig
Registergericht/Registration Office: Amtsgericht Leipzig
Handelsregister Nr./Trade Register Nr.: B 4703
Vorsitzender des Aufsichtsrats/Chairman of the Supervisory Board:
MinDirig Wilfried Kraus
Wissenschaftlicher Geschäftsführer/Scientific Managing Director:
Prof. Dr. Dr. h.c. Georg Teutsch
Administrative Geschäftsführerin/ Administrative Managing Director:
Prof. Dr. Heike Graßmann
-------------------------------------------
___________________________________________________________
Please keep all replies on the list by using "reply all"
in your mail client. To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
https://lists.galaxyproject.org/
To search Galaxy mailing lists use the unified search at:
http://galaxyproject.org/search/
