Yeah, it was intentional to avoid browser crashes years ago with very large tables. 50 was somewhat arbitrarily chosen, at the time. We could make this configurable for galaxy instances and/or increase it outright. Here's the logic in question, if you wanted to tinker with it: https://github.com/galaxyproject/galaxy/blob/dev/lib/galaxy/datatypes/tabular.py#L90
On Fri, Jun 1, 2018 at 10:04 AM Matthias Bernt <[email protected]> wrote: > Dear Dannon, > > its 59 columns :( the last columns are only sometimes 0. > > Is there a performance issue when rendering html tables with a larger > number of columns? > > What would be the Galaxy way to handle data with a larger number of > columns? > > I agree that the scidx problem is unrelated. Might be worth to open an > issue? > > Best, > Matthias > > On 01.06.2018 15:44, Dannon Baker wrote: > > I'm not familiar with MetaProSIP, but how many columns *should* be in > > the output? Galaxy automatically displays tabular data with more than > > 50 columns in the 'raw' view you're seeing here, instead of using a > > table. The last bit of data in particular, when looking at the sample, > > is a ton of `0` columns. Is that correct? > > > > One more possible issue is that this is sniffed as a `scidx` file, for > > me, though that's unrelated to the display problem here. > > > > -Dannon > > > > On Fri, Jun 1, 2018 at 9:03 AM Matthias Bernt <[email protected] > > <mailto:[email protected]>> wrote: > > > > Dear list, > > > > I'm struggling with tabular data in Galaxy. Attached is a tab > separated > > file that is generated by MetaProSIP (an updated - not yet committed > -- > > version). > > > > The problem is that it is not shown as table in Galaxy (dev) at all. > > Also the peek preview is odd, some values of the header and data are > > omitted. > > > > Is this a bug in Galaxy, or of the data in the table? > > > > Cheers, > > Matthias > > -- > > > > ------------------------------------------- > > Matthias Bernt > > Bioinformatics Service > > Molekulare Systembiologie (MOLSYB) > > Helmholtz-Zentrum für Umweltforschung GmbH - UFZ/ > > Helmholtz Centre for Environmental Research GmbH - UFZ > > Permoserstraße 15, 04318 Leipzig, Germany > > Phone +49 341 235 482296, > > [email protected] <mailto:[email protected]>, www.ufz.de < > http://www.ufz.de> > > > > Sitz der Gesellschaft/Registered Office: Leipzig > > Registergericht/Registration Office: Amtsgericht Leipzig > > Handelsregister Nr./Trade Register Nr.: B 4703 > > Vorsitzender des Aufsichtsrats/Chairman of the Supervisory Board: > > MinDirig Wilfried Kraus > > Wissenschaftlicher Geschäftsführer/Scientific Managing Director: > > Prof. Dr. Dr. h.c. Georg Teutsch > > Administrative Geschäftsführerin/ Administrative Managing Director: > > Prof. Dr. Heike Graßmann > > ------------------------------------------- > > ___________________________________________________________ > > Please keep all replies on the list by using "reply all" > > in your mail client. To manage your subscriptions to this > > and other Galaxy lists, please use the interface at: > > https://lists.galaxyproject.org/ > > > > To search Galaxy mailing lists use the unified search at: > > http://galaxyproject.org/search/ > > > > -- > > ------------------------------------------- > Matthias Bernt > Bioinformatics Service > Molekulare Systembiologie (MOLSYB) > Helmholtz-Zentrum für Umweltforschung GmbH - UFZ/ > Helmholtz Centre for Environmental Research GmbH - UFZ > Permoserstraße 15, 04318 Leipzig, Germany > Phone +49 341 235 482296, > [email protected], www.ufz.de > > Sitz der Gesellschaft/Registered Office: Leipzig > Registergericht/Registration Office: Amtsgericht Leipzig > Handelsregister Nr./Trade Register Nr.: B 4703 > Vorsitzender des Aufsichtsrats/Chairman of the Supervisory Board: > MinDirig Wilfried Kraus > Wissenschaftlicher Geschäftsführer/Scientific Managing Director: > Prof. Dr. Dr. h.c. Georg Teutsch > Administrative Geschäftsführerin/ Administrative Managing Director: > Prof. Dr. Heike Graßmann > ------------------------------------------- >
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