Dear list,
I still have problems to get my head around tool data. Lets consider
diamond for example (lets ignore data managers for the moment). After
installation it seems that there are two relevant xml files:
- `config/shed_tool_data_table_conf.xml`
-
`tool-data/toolshed.g2.bx.psu.edu/repos/bgruening/diamond/64be1ac21109/tool_data_table_conf.xml`
and two loc files:
- `tool-data/diamond_database.loc`
-
`tool-data/toolshed.g2.bx.psu.edu/repos/bgruening/diamond/64be1ac21109/diamond_database.loc`
In both xml files the latter loc file is referenced. And therefor the
tool-data/diamond_database.loc file is seemingly ignored.
What is the rational to have a loc and xml file for each tool version?
It seems that they are merged upon startup anyway.
What would be the best way to administrate a single tool loc file?
Cheers,
Matthias
--
-------------------------------------------
Matthias Bernt
Bioinformatics Service
Molekulare Systembiologie (MOLSYB)
Helmholtz-Zentrum für Umweltforschung GmbH - UFZ/
Helmholtz Centre for Environmental Research GmbH - UFZ
Permoserstraße 15, 04318 Leipzig, Germany
Phone +49 341 235 482296,
m.be...@ufz.de, www.ufz.de
Sitz der Gesellschaft/Registered Office: Leipzig
Registergericht/Registration Office: Amtsgericht Leipzig
Handelsregister Nr./Trade Register Nr.: B 4703
Vorsitzender des Aufsichtsrats/Chairman of the Supervisory Board:
MinDirig Wilfried Kraus
Wissenschaftlicher Geschäftsführer/Scientific Managing Director:
Prof. Dr. Dr. h.c. Georg Teutsch
Administrative Geschäftsführerin/ Administrative Managing Director:
Prof. Dr. Heike Graßmann
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