Are you logging in with the email adress and password registered for your Galaxy user acccount ? The authentication happens against the Galaxy database. Also keep an eye on your proftpd logs in case that wasn't the issue.
On Fri, 1 Feb 2019 at 19:25, Rui Wang <ruiwang...@gmail.com> wrote: > Hi Marius, > > Thanks for the note. The link you pasted is how I came up with the config > in the original question. However it doesn't work...it kept saying my > password is incorrect. :-( > > $ sftp -oKexAlgorithms=diffie-hellman-group14-sha1 -oPort=2222 > bioinfoadmin@localhost > bioinfoadmin@localhost's password: > Permission denied, please try again. > bioinfoadmin@localhost's password: > Permission denied, please try again. > bioinfoadmin@localhost's password: > > Not sure why this would happen. :-( Have you seen this before? > > Cheers, > Rui > > On Sun, Jan 27, 2019 at 10:49 PM Marius van den Beek < > m.vandenb...@gmail.com> wrote: > >> Hi Rui, >> >> there's a fairly complete explanation and example in in >> https://docs.galaxyproject.org/en/latest/admin/special_topics/ftp.html >> >> Hope that helps, >> Marius >> >> On Mon, 28 Jan 2019 at 07:35, Rui Wang <ruiwang...@gmail.com> wrote: >> >>> Hey Folks, >>> >>> I tried a few times with different configurations, but none worked. Did >>> anyone have the successful experience that could share? :-) >>> >>> Cheers, >>> Rui >>> >>> On Sat, Jan 19, 2019 at 1:43 PM Rui Wang <ruiwang...@gmail.com> wrote: >>> >>>> Hey Folks, >>>> >>>> I'm looking at the instructions of using ftp with proftpd. There is a >>>> section talking about extending it to use sftp. However, the sample config >>>> isn't comprehensive. I'm wondering if anyone has a working config for >>>> reference? >>>> >>>> What's the setting of user and group? It says it should match the one >>>> in the SQLNamedQuery, what does it mean exactly? I start proftpd as root, >>>> but start galaxy as bioinfoadmin(normal user with sudo). >>>> >>>> Just fyi, my proftpd config module and config file are pasted below. >>>> I'm working it out on a trial and error fashion, please feel free to point >>>> out if anything is wrong! >>>> >>>> Cheers, >>>> Rui >>>> >>>> modules: >>>> $ sbin/proftpd -l >>>> Compiled-in modules: >>>> mod_core.c >>>> mod_xfer.c >>>> mod_rlimit.c >>>> mod_auth_unix.c >>>> mod_auth.c >>>> mod_ls.c >>>> mod_log.c >>>> mod_site.c >>>> mod_delay.c >>>> mod_facts.c >>>> mod_sql.c >>>> mod_sql_postgres.c >>>> mod_sql_passwd.c >>>> mod_sftp.c >>>> mod_cap.c >>>> >>>> etc/proftpd.conf >>>> >>>> ServerType standalone >>>> # You must put this in a virtual host if you want it to listen on its >>>> own port. VHost != Apache Vhost. >>>> <VirtualHost 10.3.17.42> >>>> Port 2222 >>>> SFTPEngine on >>>> AuthOrder mod_auth_unix.c mod_sql.c # If you don't do this you will >>>> get weird disconnects >>>> SFTPHostKey /etc/ssh/ssh_host_rsa_key >>>> RequireValidShell no >>>> MaxLoginAttempts 6 >>>> ServerName "Galaxy SFTP" >>>> DefaultServer on >>>> Umask 077 >>>> User bioinfoadmin >>>> Group bioinfoadmin >>>> UseFtpUsers off >>>> DefaultRoot ~ >>>> AllowOverwrite on >>>> AllowStoreRestart on >>>> SQLEngine on >>>> SQLGroupInfo sftp_groups name id members >>>> >>>> # Do not authenticate against real (system) users >>>> <IfModule mod_auth_pam.c> >>>> AuthPAM off >>>> </IfModule> >>>> >>>> # Common SQL authentication options >>>> SQLPasswordEngine on >>>> SQLBackend postgres >>>> SQLConnectInfo gal...@galaxy.my.org:5432 bioinfoadmin >>>> dbpwd >>>> SQLAuthenticate users >>>> >>>> # Configuration that handles PBKDF2 encryption >>>> # Set up mod_sql to authenticate against the Galaxy database >>>> SQLAuthTypes PBKDF2 >>>> SQLPasswordPBKDF2 SHA256 10000 24 >>>> SQLPasswordEncoding base64 >>>> SQLPasswordUserSalt sql:/GetUserSalt >>>> >>>> # Define a custom query for lookup that returns a passwd-like entry. >>>> Replace 512s with the UID and GID of the user running the Galaxy server >>>> SQLUserInfo custom:/LookupGalaxyUser >>>> SQLNamedQuery LookupGalaxyUser SELECT "email, (CASE >>>> WHEN substring(password from 1 for 6) = 'PBKDF2' THEN substring(password >>>> from 38 for 69) ELSE password END) AS >>>> password2,512,512,'/media/galaxy/galaxy/database/ftp/%U','/bin/bash' FROM >>>> galaxy_user WHERE email='%U'" >>>> >>>> # Define custom query to fetch the password salt >>>> SQLNamedQuery GetUserSalt SELECT "(CASE WHEN >>>> SUBSTRING (password from 1 for 6) = 'PBKDF2' THEN SUBSTRING (password from >>>> 21 for 16) END) AS salt FROM galaxy_user WHERE email='%U'" >>>> </VirtualHost> >>>> >>>> # Don't use IPv6 support by default. >>>> UseIPv6 off >>>> MaxInstances 30 >>>> >>>> # To cause every FTP user to be "jailed" (chrooted) into their home >>>> # directory, uncomment this line. >>>> # Bar use of SITE CHMOD by default >>>> <Limit SITE_CHMOD> >>>> DenyAll >>>> </Limit> >>>> >>>> # Bar use of RETR (download) since this is not a public file drop >>>> <Limit RETR> >>>> DenyAll >>>> </Limit> >>>> ~ >>>> >>>> ___________________________________________________________ >>> Please keep all replies on the list by using "reply all" >>> in your mail client. 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