Giovanni: The conversion table can be found at NCBI's FTP site for Entrez gene.
ftp://ftp.ncbi.nih.gov/gene/DATA/gene2refseq.gz This should be updated daily and the EntrezID will correspond to the GeneID in this table. Just subset for the TaxID of c-elegans, 6239, and you should be able to pull out just what you need. -'jish -- Ajish D. George Postdoctoral Fellow Dept. of Genetics & Genomic Sciences Mt. Sinai School of Medicine 1425 Madison Ave, New York, NY 10029 > > ------------------------------ > > Message: 2 > Date: Thu, 10 Feb 2011 18:17:54 -0500 > From: giovanni stefani <giovanni.stef...@yale.edu> > To: galaxy-u...@bx.psu.edu > Subject: [galaxy-user] entrez ID to Refseq or gene symbol > Message-ID: <0dee6bfa-902b-4ca6-9582-8e5352a53...@yale.edu> > Content-Type: text/plain; charset=us-ascii > > Hello, > > does anyone know how to convert entrez I.D. to either Refseq ID or Gene > Symbols? > I have found resources on Refseq to Gene Symbol conversion, but I can't find > anything on Entrez I.D. > The genome I work with is C. elegans. > Any suggestion will be greatly appreciated. > Best, > > Giovanni > _______________________________________________ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list: http://lists.bx.psu.edu/listinfo/galaxy-dev To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
