Hi Christine,

Would you like to share a link to your history? Use Options -> Share or Publish and we can take a look at the input data (likely the source of problem).


Best,

Jen
Galaxy team

On 2/11/11 7:20 AM, Christine Picard wrote:
I am a new user to Galaxy, and I was hoping someone might be able to
help with this small problem.  I am using Drosophila resequencing data
downloaded from the SRA and trying to look for SNPs that differentiate
the two strains.  I've gotten as far as generating the pileup for each
strain, but my column which has the consensus base is always an N.  Can
anyone help me out?

thanks, Christine

--
Christine J. Picard, Ph.D.
Postdoctoral Research Associate
Department of Entomology
Texas A&M University
TAMU 2475
College Station, TX
77843-2475
christine.pic...@gmail.com <mailto:christine.pic...@gmail.com>



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http://galaxyproject.org
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The Galaxy User list should be used for the discussion of Galaxy analysis and
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