For now we are going to recommended just using the Fastq Groomer first,
then the Clipper, to keep the tools set simple.
Apologies for the late reply, we were discussing the option internally.
Thanks for all the great ideas and contributions!
On 1/6/11 4:28 AM, Peter wrote:
Should the fastx_clipper.xml allow Illumina 1.3+ FASTQ as well as
Sanger and Solexa FASTQ (and FASTA)?
i.e. replace this:
<param format="fasta,fastqsolexa,fastqsanger" name="input" type="data"
label="Library to clip" />
name="input" type="data" label="Library to clip" />
galaxy-user mailing list
The Galaxy User list should be used for the discussion
of Galaxy analysis and other features on the public
server at usegalaxy.org. For discussion of local Galaxy
instances and the Galaxy source code, please use the
Galaxy Development list:
To manage your subscriptions to this and other
Galaxy lists, please use the interface at: