Hello Falak,

The tools in "Text Manipulation", "Filter and Sort", and "Join, Subtract and Group" are designed to help with this type of file analysis (basic stats). Please explore and let us know if you need help with any particular tool,


Best,

Jen
Galaxy team

On 4/18/11 7:47 AM, Sher, Falak wrote:
Hi Colleagues,
I mapped illumina sequences using Bowtie on Galaxy server, I could not locate 
the information, like how many there were total reads and in what percentage 
they are mapped with mouse genome etc (samples were from mouse).

Help and suggestions are greatly acknowledged,

Thank you for attention,

Falak

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