Hi all ,
I have a set of 1500 sequence obtained from my Chip_Seq experiment. I am 
interested to Know how many of them are within Conserved non coding Region. My 
definition of conserved Non coding region is as follows

1.       Atleast a 200bp region with 80% conservation between Human , Mice and 

2.        Atleast a 200bp region with 70% conservation between Human , Mice , 
Chicken  and Fish
If someone can suggest me how to use galaxy for this purpose.
Thanks in advance.

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