Hi jen and galaxy users, when I try to use cufflinks in GALAXY and select "use 
reference annotation", I am NOT sure how to get the annotation file in GTF 
format for cufflinks.

I was trying to down-load the annotation file from Illumina donated package in 
Cufflink website, I am NOT sure this is the right way to go for?



The Galaxy User list should be used for the discussion of
Galaxy analysis and other features on the public server
at usegalaxy.org.  Please keep all replies on the list by
using "reply all" in your mail client.  For discussion of
local Galaxy instances and the Galaxy source code, please
use the Galaxy Development list:


To manage your subscriptions to this and other Galaxy lists,
please use the interface at:


Reply via email to