Hi all

We are working with chip-chip data of S. cerevisiae (from Affymetrix) and 
actually we have two problems and we don´t know if it´s possible to perform in 

 1.  We use the tool intersect to get the annotation of positive genomic 
regions in our file bed. After, we need calculate statistical enrichments for 
associations between genomics regions and annotations. It´s this possible in 
 2.  Other query. How plot for visual inspection enrichment ratio profile 
versus different sets of genomic loci (i.e.: tRNA, LTR,…)

Best Regards,

☺If you have used the Services of the Genomics Unit of Cabimer, we would be 
grateful if you would give us a mention in future publications
Mónica Pérez Alegre, PhD
Genomics Unit
Edif. CABIMER - Avda. Américo Vespucio s/n
Parque Científico y Tecnológico Cartuja 93
41092 Seville-SPAIN
Tlf:   +34 954 467 828
Fax: +34 954 461 664

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