On 19/10/11 23:31, Daniel Blankenberg wrote:

Sorry for the delay. I did try the patch out shortly after you contributed it, but it caused the functional to fail. I was able to fix the issue and allow the existing tests to start passing, but I've been bogged down lately and haven't been able to perform a more thorough review of the code. If you could provide tests with files (e.g. for the tools affected) that test the new functionality, that would be a great help.

Hi Dan,
I finally addressed your comments. See the updated pull request: https://bitbucket.org/galaxy/galaxy-central/pull-request/8/paired-end-code-mishandles-description-of

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