I have two small RNA libraries that are biological replicates. I mapped
the reads onto the genome using Bowtie and displayed the BAM files as
two individual tracks on the UCSC genome browser. However, this is not
Ideally, I would like to color the reads from each library with a
different color, so that I could display them in the SAME track. Because
the two replicates are color labeled, I would be able to tell which
experiment a particular read comes from.
I have two BAM files from each library. All I need to do is to label
them with different colors, then merge them before displaying on genome
Does anyone know how to do this?
Thanks in advance for your help!
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