Sorry to hear you're having trouble and no, the behavior you describe is
not the expected behavior.
>From the description, unfortunately it does not sound like adding more
nodes will help the case.
Could you take a look at the log files for Galaxy and see if anything there
is indicating as to what may be happening? Feel free to paste the log in
your reply so we can take a look too. The Galaxy log is accessible on
CloudMan's Admin page (link is in top right hand corner of the CloudMan
What specific tool(s) were you using when this happened? Does the same tool
work with the smaller files?
On Tue, Jan 24, 2012 at 8:57 PM, Dave Lin <d...@verdematics.com> wrote:
> Dear Galaxy Team,
> I seem to get quite a few "Cluster could not complete job" error messages
> when trying to process larger solid files. In some cases, re-running the
> same job does the trick.
> Is this due to something I've misconfigured (i.e. some time-out setting)
> or is this expected behavior? Any suggestions (i.e. increase number of
> - Running own instance of Galaxy using Cloudman
> - Galaxy code is updated (within 1 week)
> - Only have 1 node running.
> - Nobody else is using the system yet.
> P.S. New to galaxy and pretty impressed so far.
> Running the Galaxy
> The Galaxy User list should be used for the discussion of
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> using "reply all" in your mail client. For discussion of
> local Galaxy instances and the Galaxy source code, please
> use the Galaxy Development list:
> To manage your subscriptions to this and other Galaxy lists,
> please use the interface at:
The Galaxy User list should be used for the discussion of
Galaxy analysis and other features on the public server
at usegalaxy.org. Please keep all replies on the list by
using "reply all" in your mail client. For discussion of
local Galaxy instances and the Galaxy source code, please
use the Galaxy Development list:
To manage your subscriptions to this and other Galaxy lists,
please use the interface at: