On Tue, Apr 24, 2012 at 10:24 PM, Jennifer Jackson <j...@bx.psu.edu> wrote: > > ..., using > the BLAST+ BLASTN megablast wrapper that Peter authored, in a local or cloud > instance, would be the best immediate remedy (this version has the standard > 12 column output). Sequence length data could always be obtained from > Genbank and added into these results using other Galaxy tools (column join, > etc.).
Getting the query and match sequence lengths is even simpler that that with the BLAST+ wrappers - just select the "extended" tabular output. Of course, you'll need to adjust the downstream analysis to take into account the different column numbers. Peter ___________________________________________________________ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. Please keep all replies on the list by using "reply all" in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list: http://lists.bx.psu.edu/listinfo/galaxy-dev To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/