On Tue, Apr 24, 2012 at 11:08 PM, Jennifer Jackson <j...@bx.psu.edu> wrote:
> Thanks Peter,
> Excellent point. From there, the "Cut" tool could be used to reorganize the
> output to exactly match that of the 13-column regular megablast output. So,
> no external data needed, no tool modifications needed.
> This can't be done on the main public Galaxy instance as BLAST+ is not
> available there, but for any local/cloud instance this is an alternative
> certainly work testing.
> Best,
> Jen

I see Anton has just updated the Galaxy megablast tool to use BLAST+
internally now, getting blastn to produce the specific 13 columns desired.

So once that change goes live it will probably resolve this issue.

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