Sorry, I did not read carefully. All three samples are listed, just
down in the column I found the other sample.


On Sat, Aug 11, 2012 at 7:41 PM, i b <> wrote:
> Dear all,
> I ran Cuffdiff with 3 groups: A, B, C each with 2, 5 and 1 replicates
> respectively.
> When looking  at the transcripts dif.exp.testing, I have only sample A
> and B and redpective values.
> What happened to sample C?
> Thanks for any help.
> ib
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