Hello,

The tool "FreeBayes" may be of interest. Please see the tool form for links to the primary tool documentation to see if the functionality will meet your needs.

Best,

Jen
Galaxy team

On 8/15/12 4:46 AM, shamsher jagat wrote:
Is there any tool/ combination of tools with in galaxy which can detect
CNV. I have 100X paired sequencing data between cancer and normal.
Thanks


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Jennifer Jackson
http://galaxyproject.org
___________________________________________________________
The Galaxy User list should be used for the discussion of
Galaxy analysis and other features on the public server
at usegalaxy.org.  Please keep all replies on the list by
using "reply all" in your mail client.  For discussion of
local Galaxy instances and the Galaxy source code, please
use the Galaxy Development list:

 http://lists.bx.psu.edu/listinfo/galaxy-dev

To manage your subscriptions to this and other Galaxy lists,
please use the interface at:

 http://lists.bx.psu.edu/

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