Hi Branden,

Data in a library needs to be uncompressed in order for Galaxy to index and have access to it correctly.


I updated our wiki for the "upload by filesystem link" option:
http://wiki.g2.bx.psu.edu/Admin/Data%20Libraries/Uploading%20Library%20Files

Good question!

Jen
Galaxy team

On 8/15/12 9:09 AM, Branden Timm wrote:
Hi All,
   Is it possible to link to compressed files in a Galaxy data library?
We receive all of our NGS data in bz2 or gzip format for obvious
reasons, just wondering if I have to decompress it on the filesystem
before I link to it or not.  Thanks!

--
Branden Timm
bt...@glbrc.wisc.edu
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