Hi Kanwar, > I interested in trying Bismark under Galaxy. Could you please point me > where I can use it.
please have a look at the pull request ... https://bitbucket.org/galaxy/galaxy-central/pull-request/73/bismark-wrapper-issue-626 Cheers, bjoern > > Thanks > Kanwar > > On Mon, Oct 8, 2012 at 8:08 AM, Björn Grüning > <bjoern.gruen...@pharmazie.uni-freiburg.de> wrote: > Hi David, > > please do not hijack a different thread :) > If you are analysing Bisulfite data i would recommend to have > a look at > http://www.bioinformatics.babraham.ac.uk/projects/ ... > especially at > bismark. > > We have written a wrapper for bismark, its still in testing > phase but if > you like to try it out, you are welcome. > > Cheers, > Bjoern > > > Hi, there, > > > > I just got two genome-wide Bisulfite sequences from BGI and > start to > > analyze the data. > > > > I am trying to use Galaxy; but I find there is no such > platform > > available. Does anybody know where I can find this kind > platform at > > Galaxy or other places. > > > > Thanks > > > > David > > > > ___________________________________________________________ > The Galaxy User list should be used for the discussion of > Galaxy analysis and other features on the public server > at usegalaxy.org. Please keep all replies on the list by > using "reply all" in your mail client. For discussion of > local Galaxy instances and the Galaxy source code, please > use the Galaxy Development list: > > http://lists.bx.psu.edu/listinfo/galaxy-dev > > To manage your subscriptions to this and other Galaxy lists, > please use the interface at: > > http://lists.bx.psu.edu/ > > ___________________________________________________________ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. Please keep all replies on the list by using "reply all" in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list: http://lists.bx.psu.edu/listinfo/galaxy-dev To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
