Hi Jerzy,

To load data in batch on a local install, use the Data library function. The admin can do this and you can also grant permissions to specific users. Please see these wiki pages for details:


http://wiki.g2.bx.psu.edu/Admin/Data%20Libraries/Libraries
http://wiki.g2.bx.psu.edu/Admin/Data%20Libraries/Uploading%20Library%20Files

The first is an overview, the second has details for various loading options, including through a file system. The idea is to load into a Data Library, then import into histories through the UI. There is no data duplication, it is done through references.

Hopefully this helps,

Jen
Galaxy team

On 10/12/12 5:04 AM, Jerzy Dyczkowski wrote:
Hello,

How to put data to the local Galaxy server via ftp, ssh or copying
directly to some subfolder in galaxy-dist?

We installed a local Galaxy instance and it is running. Manual uploading
files from user PCs is slow due to less than perfect connections in the
local network. We would prefer uploading large files by ssh from the
central cluster to the server on which Galaxy is running. I can conect
to the Galaxy server and Galaxy folder structure, however, I cannot find
where to put files. Are they all renamed and coded as something like:
galaxy-dist/database/files/000/dataset_38.dat ?

The option of uploading via ftp on main.g2.bx.psu.edu is absent in local
Galaxy distribution.

best regards,

Jerzy
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http://galaxyproject.org
___________________________________________________________
The Galaxy User list should be used for the discussion of
Galaxy analysis and other features on the public server
at usegalaxy.org.  Please keep all replies on the list by
using "reply all" in your mail client.  For discussion of
local Galaxy instances and the Galaxy source code, please
use the Galaxy Development list:

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please use the interface at:

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