Hi, The instance ran out of space very quickly as soon as i import ~4 3GB fastq file. The problem turns out to be identical as described here ... http://gmod.827538.n3.nabble.com/Re-galaxy-user-Problem-using-Galaxy-on-the-cloud-td3805376.html#a3808628 Is there any permanent fix available that is already baked into the entire cloud setup and workflow.
For the time being, i circumvent the issue by mounting the /tmp in a separate ebs volume partition(~50GB), adding it in /etc/fstab and then reboot the machine. However, the /tmp has to be mounted without *noexec* option since the upstart python script executes another python script(cm_boot.py possibly) from /tmp to start the cloudman webapp. thanks, -siddhartha ___________________________________________________________ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. Please keep all replies on the list by using "reply all" in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list: http://lists.bx.psu.edu/listinfo/galaxy-dev To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/