Hello Jedd,

This would be a good case for using a Custom reference genome. Instructions are here:
http://wiki.galaxyproject.org/Support#Custom_reference_genome

Take care,

Jen
Galaxy team

On 8/2/13 6:23 AM, Mr. Lai U Ming, Julian wrote:
Hi,

I'm working on the filamentous fungi, Neurospora crassa and would like to use Galaxy to do some RNASeq analysis. Could you please load the Neurospora crassa genome into the reference data base on Galaxy. The sequences can be found at EnsemblFungi and at the Broad Intitute site. Could you please let me know which of the data set is used so that I can get the .gtf file. Thanks.

Best regards,

Julian Lai
Junior Research Fellow
Jedd Group
Temasek Life Sciences Laboratory
1 Research Link
National University of Singapore
Singapore 117604




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