I used Tophat2 for 32 files and all worked well.
I did not have any problem with it.
[galaxy-user-boun...@lists.bx.psu.edu] on behalf of Delong, Zhou
Sent: 29 August 2013 14:57
Subject: [galaxy-user] Tophat2 not working?
I've been trying tophat 2 on the public server since last week but I don't get
any results. I got one empty output for " the output datasets were deleted
while the job was running, the job was manually dequeued or there was a cluster
error." one error with " Unable to queue job for execution. Resubmitting the
job may succeed." and one empty output with no error message.
It seems that tophat 2 is new on the server, has anyone run it with success yet?
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