Yes, during the change several accounts are known to have experienced
jobs that failed. The solution is a re-run.
I re-run exact duplicates from one of you histories with failures (one
of those sent in as a but report - the Talarazole history, Cuffdiff and
Tophat in particular) and these were successful after started them later
I do see the reported Tophat error - we will investigate.
The Cufflinks run recent reported as errors seem to have an issue with
form parameters, likely due to the updated tool version.
Adjusting/adding in the labels will most likely resolve this problem
(not a simple re-run).
I will get back to you via the bug reports shortly explaining each
Thanks for reporting the issuess - all likely will be resolved quickly.
Your feedback is much appreciated!
On 10/10/13 9:04 AM, Elwood Linney wrote:
Is anyone who had developed histories on Galaxy online before the
changeover getting red error messages after the changeover for tophat
or cuffdiff processing?
I have now tried a few times to move forward without luck and will
remove at least one of my histories and start all over again just in
case there is some kind of mismatch in the processing.
Before I remove them all and start them all over, I would appreciate
knowing if anyone else has identified where the block is.
The Galaxy User list should be used for the discussion of
Galaxy analysis and other features on the public server
at usegalaxy.org. Please keep all replies on the list by
using "reply all" in your mail client. For discussion of
local Galaxy instances and the Galaxy source code, please
use the Galaxy Development list:
To manage your subscriptions to this and other Galaxy lists,
please use the interface at:
To search Galaxy mailing lists use the unified search at: