Hi Cory,
A list of Galaxy dependancies can be found on the wiki at:
...although many tools allow a range of tool versions.

You can also identify the information about the specific tool versions by
clicking on the View Details Œi¹ icon of a history item created by that
tool and looking at the Tool Version field.
If you¹re using the Galaxy public server (https://usegalaxy.org/) then
clicking on the Œi¹ icon of a cuffdiff output file will show:

Tool Version:cuffdiff v2.1.1 (4046M)
Hope this helps.


Dr. Graham Etherington
Bioinformatics Support Officer,
The Sainsbury Laboratory,
Norwich Research Park,
Norwich NR4 7UH.
Tel: +44 (0)1603 450601

On 04/11/2013 20:57, "Cory Dunn" <cd...@ku.edu.tr> wrote:

>Dear Galaxy Staff:
>I was wondering which version of Cuffdiff is currently running on Galaxy.
> The wrapper version is 0.0.6, but I did not see the actual version of
>the underlying software under the "Tool Version" field (please see
>attached screen grab).
>Thanks for your help,
>Cory Dunn

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