Hi Scott,

This genome is available in most mapping tools, so a positive match could be used to identify the control. But if you just want to leave it behind, control should fall out during mapping against the sample's target genome (if available).


Best,

Jen
Galaxy team

On 4/4/14 12:33 PM, Scott Tighe wrote:
Dear Team Galaxy

Is there a simple way to filter PhiX control from a sample set?

S


--
Jennifer Hillman-Jackson
http://galaxyproject.org

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