Revision: 19618
          http://sourceforge.net/p/gate/code/19618
Author:   markagreenwood
Date:     2016-10-03 15:13:57 +0000 (Mon, 03 Oct 2016)
Log Message:
-----------
started to renable the tests

Added Paths:
-----------
    gate/branches/sawdust2/gate-core/src/test/java/gate/TestUtils.java
    gate/branches/sawdust2/gate-core/src/test/java/gate/annotation/
    gate/branches/sawdust2/gate-core/src/test/java/gate/corpora/
    gate/branches/sawdust2/gate-core/src/test/java/gate/persist/
    gate/branches/sawdust2/gate-core/src/test/java/gate/util/
    gate/branches/sawdust2/gate-core/src/test/java/gate/util/TestEqual.java

Removed Paths:
-------------
    gate/branches/sawdust2/gate-core/src/test/disabled/gate/TestUtils.java
    gate/branches/sawdust2/gate-core/src/test/disabled/gate/annotation/
    gate/branches/sawdust2/gate-core/src/test/disabled/gate/corpora/
    gate/branches/sawdust2/gate-core/src/test/disabled/gate/persist/
    gate/branches/sawdust2/gate-core/src/test/disabled/gate/util/TestEqual.java

Deleted: gate/branches/sawdust2/gate-core/src/test/disabled/gate/TestUtils.java
===================================================================
--- gate/branches/sawdust2/gate-core/src/test/disabled/gate/TestUtils.java      
2016-10-03 10:27:28 UTC (rev 19617)
+++ gate/branches/sawdust2/gate-core/src/test/disabled/gate/TestUtils.java      
2016-10-03 15:13:57 UTC (rev 19618)
@@ -1,102 +0,0 @@
-/*
- *  TestAnnotation.java
- *
- *  Copyright (c) 1995-2015, The University of Sheffield. See the file
- *  COPYRIGHT.txt in the software or at http://gate.ac.uk/gate/COPYRIGHT.txt
- *
- *  This file is part of GATE (see http://gate.ac.uk/), and is free
- *  software, licenced under the GNU Library General Public License,
- *  Version 2, June 1991 (in the distribution as file licence.html,
- *  and also available at http://gate.ac.uk/gate/licence.html).
- *
- */
-
-package gate;
-
-import junit.framework.*;
-
-import static gate.Utils.*;
-import gate.creole.ResourceInstantiationException;
-import gate.util.InvalidOffsetException;
-
-/** 
- * Tests for the gate.Utils methods 
- */
-public class TestUtils extends TestCase
-{
-  /** Construction */
-  public TestUtils(String name) { super(name); }
-
-  /** 
-   * Fixture set up.
-   * 
-   * @throws java.lang.Exception 
-   */
-  @Override
-  public void setUp() throws Exception
-  {
-    Gate.setNetConnected(false);
-    if (Gate.getGateHome() == null) Gate.init();
-  } // setUp
-
-
-  // test getting and combining annotations
-  public void testAnnotationSetHandling() 
-          throws InvalidOffsetException, ResourceInstantiationException {
-    // create a new document of 100 spaces
-    Document doc = Factory.newDocument(new String(new char[100]).replace("\0", 
" "));
-    // get an annotation set for the first couple of tests
-    AnnotationSet set1 = doc.getAnnotations("s1");
-    // add 3 coextensive annotations on top of each other
-    Annotation ann1_1 = set1.get(addAnn(set1,0,5,"t1.1",featureMap()));
-    Annotation ann1_2 = set1.get(addAnn(set1,0,5,"t1.2",featureMap()));
-    Annotation ann1_3 = set1.get(addAnn(set1,0,5,"t1.3",featureMap()));
-    // add 3 overlapping annotations
-    Annotation ann2_1 = set1.get(addAnn(set1,10,15,"t2.1",featureMap()));
-    Annotation ann2_2 = set1.get(addAnn(set1,11,16,"t2.2",featureMap()));
-    Annotation ann2_3 = set1.get(addAnn(set1,12,17,"t2.3",featureMap()));
-    
-    AnnotationSet ret = getCoextensiveAnnotations(set1,ann1_1);
-    assertEquals(3, ret.size());
-    
-    ret = minus(ret,ann1_1);
-    assertEquals(2, ret.size());
-    
-    ret = minus(ret,ann2_1);
-    assertEquals(2, ret.size());
-    
-    ret = minus(ret);
-    assertEquals(2, ret.size());
-    
-    ret = minus(ret,ann1_2);
-    assertEquals(1, ret.size());
-    
-    ret = getOverlappingAnnotations(set1, ann2_1);
-    assertEquals(3, ret.size());
-    
-    ret = plus(ret,ann1_2);
-    assertEquals(4, ret.size());
-    
-    ret = intersect(getCoextensiveAnnotations(set1,ann1_1),ret);
-    assertEquals(1, ret.size());
-    
-    
-  } // testAnnotationSetHandling
-
-  public static Test suite() {
-    return new TestSuite(TestUtils.class);
-  } // suite
-  
-  
-  public static void main(String[] args){
-
-    try{
-      TestUtils testUtils = new TestUtils("");
-      testUtils.setUp();
-      testUtils.testAnnotationSetHandling();
-    }catch(Throwable t){
-      t.printStackTrace(System.err);
-    }
-  }
-} // class TestAnnotation
-

Deleted: 
gate/branches/sawdust2/gate-core/src/test/disabled/gate/util/TestEqual.java
===================================================================
--- gate/branches/sawdust2/gate-core/src/test/disabled/gate/util/TestEqual.java 
2016-10-03 10:27:28 UTC (rev 19617)
+++ gate/branches/sawdust2/gate-core/src/test/disabled/gate/util/TestEqual.java 
2016-10-03 15:13:57 UTC (rev 19618)
@@ -1,145 +0,0 @@
-/*
- *  Copyright (c) 1995-2012, The University of Sheffield. See the file
- *  COPYRIGHT.txt in the software or at http://gate.ac.uk/gate/COPYRIGHT.txt
- *
- *  This file is part of GATE (see http://gate.ac.uk/), and is free
- *  software, licenced under the GNU Library General Public License,
- *  Version 2, June 1991 (in the distribution as file licence.html,
- *  and also available at http://gate.ac.uk/gate/licence.html).
- *
- *  Valentin Tablan 12 July 2002
- *
- *  $Id$
- */
-
-package gate.util;
-
-import gate.*;
-
-/**
- * This class provides some static utility methods such as equality test for
- * annotation sets and documents. They are mainly used by test classes.
- */
-public class TestEqual {
-  /**
-   * Checks two documents for equality.
-   * @param doc1 a document
-   * @param doc2 another document
-   * @return a boolean.
-   */
-  public static boolean documentsEqual(Document doc1, Document doc2){
-    message = "";
-    if(doc1 == null ^ doc2 == null){
-      message = "Documents not equal: null<>non-null!";
-      return false;
-    }
-    if(doc1 == null) return true;
-    if(! check(doc1.getContent(), doc2.getContent())){
-      message = "Document contents different!";
-      return false;
-    }
-
-    if(! check(doc1.getAnnotations(), doc2.getAnnotations())){
-      message = "Documents default AS not equal!";
-      return false;
-    }
-
-    if(doc1 instanceof TextualDocument){
-      if(doc2 instanceof TextualDocument){
-        if(! check(((TextualDocument)doc1).getEncoding(),
-                   ((TextualDocument)doc2).getEncoding())){
-          message = "Textual documents with different encodings!";
-          return false;
-        }
-      }else{
-        message = "Documents not equal: textual<>non-textual!";
-        return false;
-      }
-    }
-    if(! check(doc1.getFeatures(), doc2.getFeatures())){
-      message = "Documents features not equal!";
-      return false;
-    }
-
-//needs friend declaration :(
-//    if(!markupAware.equals(doc.markupAware)) return false;
-
-    if(! check(doc1.getNamedAnnotationSets(),
-               doc2.getNamedAnnotationSets())){
-      message = "Documents named annots not equal!";
-      return false;
-    }
-
-//    if(doc1 instanceof DocumentImpl){
-//      if(doc2 instanceof DocumentImpl){
-//        if(! check(((DocumentImpl)doc1).getNextNodeId(),
-//                   ((DocumentImpl)doc2).getNextNodeId())){
-//          message = "Documents next nodeID not equal!";
-//          return false;
-//        }
-//        if(! check(((DocumentImpl)doc1).getNextAnnotationId(),
-//                   ((DocumentImpl)doc2).getNextAnnotationId())){
-//          message = "Documents next annotationIDs not equal!";
-//          return false;
-//        }
-//      }else{
-//        message = "Documents not equal: DocumentImpl<>non-DocumentImpl!";
-//        return false;
-//      }
-//    }
-
-    if(! check(doc1.getSourceUrl(), doc2.getSourceUrl())){
-      message = "Documents sourceURLs not equal!";
-      return false;
-    }
-    if(! (check(doc1.getSourceUrlStartOffset(),
-               doc2.getSourceUrlStartOffset())
-         &&
-         check(doc1.getSourceUrlEndOffset(),
-               doc2.getSourceUrlEndOffset()))){
-      message = "Documents sourceURLOffsets not equal!";
-      return false;
-    }
-    return true;
-  }
-
-  /** Two AnnotationSet are equal if their name, the documents of which belong
-    *  to the AnnotationSets and annotations from the sets are the same
-    */
-  public static boolean annotationSetsEqual(AnnotationSet as1,
-                                            AnnotationSet as2) {
-    if(as1 == null ^ as2 == null) return false;
-    if(as1 == null) return true;
-    //Sets equality
-    if(as1.size() != as2.size()) return false;
-    try{
-      if(! as1.containsAll(as2)) return false;
-    }catch(ClassCastException unused)   {
-      return false;
-    }catch(NullPointerException unused) {
-      return false;
-    }
-
-//removed to prevent infinite looping in testDocumentsEqual()
-//    // verify the documents which they belong to
-//    if (! check (as1.getDocument(), as2.getDocument())) return false;
-
-    // verify the name of the AnnotationSets
-    if (! check(as1.getName(), as2.getName())) return false;
-    return true;
-  } // equals
-
-
-
-
-  /** Check: test 2 objects for equality */
-  static protected boolean check(Object a, Object b) {
-    if(a == null || b == null) return a == b;
-    else return a.equals(b);
-  } // check(a,b)
-
-  /**
-   * If set to true, explanation messages will be printed when a test fails.
-   */
-  public static String message = "";
-}
\ No newline at end of file

Copied: gate/branches/sawdust2/gate-core/src/test/java/gate/TestUtils.java 
(from rev 19617, 
gate/branches/sawdust2/gate-core/src/test/disabled/gate/TestUtils.java)
===================================================================
--- gate/branches/sawdust2/gate-core/src/test/java/gate/TestUtils.java          
                (rev 0)
+++ gate/branches/sawdust2/gate-core/src/test/java/gate/TestUtils.java  
2016-10-03 15:13:57 UTC (rev 19618)
@@ -0,0 +1,86 @@
+/*
+ *  TestAnnotation.java
+ *
+ *  Copyright (c) 1995-2015, The University of Sheffield. See the file
+ *  COPYRIGHT.txt in the software or at http://gate.ac.uk/gate/COPYRIGHT.txt
+ *
+ *  This file is part of GATE (see http://gate.ac.uk/), and is free
+ *  software, licenced under the GNU Library General Public License,
+ *  Version 2, June 1991 (in the distribution as file licence.html,
+ *  and also available at http://gate.ac.uk/gate/licence.html).
+ *
+ */
+
+package gate;
+
+import junit.framework.*;
+
+import static gate.Utils.*;
+import gate.creole.ResourceInstantiationException;
+import gate.util.InvalidOffsetException;
+
+/** 
+ * Tests for the gate.Utils methods 
+ */
+public class TestUtils extends TestCase
+{
+  /** Construction */
+  public TestUtils(String name) { super(name); }
+
+  /** 
+   * Fixture set up.
+   * 
+   * @throws java.lang.Exception 
+   */
+  @Override
+  public void setUp() throws Exception
+  {
+    Gate.setNetConnected(false);
+    if (Gate.getGateHome() == null) Gate.init();
+  } // setUp
+
+
+  // test getting and combining annotations
+  public void testAnnotationSetHandling() 
+          throws InvalidOffsetException, ResourceInstantiationException {
+    // create a new document of 100 spaces
+    Document doc = Factory.newDocument(new String(new char[100]).replace("\0", 
" "));
+    // get an annotation set for the first couple of tests
+    AnnotationSet set1 = doc.getAnnotations("s1");
+    // add 3 coextensive annotations on top of each other
+    Annotation ann1_1 = set1.get(addAnn(set1,0,5,"t1.1",featureMap()));
+    Annotation ann1_2 = set1.get(addAnn(set1,0,5,"t1.2",featureMap()));
+    Annotation ann1_3 = set1.get(addAnn(set1,0,5,"t1.3",featureMap()));
+    // add 3 overlapping annotations
+    Annotation ann2_1 = set1.get(addAnn(set1,10,15,"t2.1",featureMap()));
+    Annotation ann2_2 = set1.get(addAnn(set1,11,16,"t2.2",featureMap()));
+    Annotation ann2_3 = set1.get(addAnn(set1,12,17,"t2.3",featureMap()));
+    
+    AnnotationSet ret = getCoextensiveAnnotations(set1,ann1_1);
+    assertEquals(3, ret.size());
+    
+    ret = minus(ret,ann1_1);
+    assertEquals(2, ret.size());
+    
+    ret = minus(ret,ann2_1);
+    assertEquals(2, ret.size());
+    
+    ret = minus(ret);
+    assertEquals(2, ret.size());
+    
+    ret = minus(ret,ann1_2);
+    assertEquals(1, ret.size());
+    
+    ret = getOverlappingAnnotations(set1, ann2_1);
+    assertEquals(3, ret.size());
+    
+    ret = plus(ret,ann1_2);
+    assertEquals(4, ret.size());
+    
+    ret = intersect(getCoextensiveAnnotations(set1,ann1_1),ret);
+    assertEquals(1, ret.size());
+    
+    
+  } // testAnnotationSetHandling
+} // class TestAnnotation
+

Copied: gate/branches/sawdust2/gate-core/src/test/java/gate/util/TestEqual.java 
(from rev 19617, 
gate/branches/sawdust2/gate-core/src/test/disabled/gate/util/TestEqual.java)
===================================================================
--- gate/branches/sawdust2/gate-core/src/test/java/gate/util/TestEqual.java     
                        (rev 0)
+++ gate/branches/sawdust2/gate-core/src/test/java/gate/util/TestEqual.java     
2016-10-03 15:13:57 UTC (rev 19618)
@@ -0,0 +1,145 @@
+/*
+ *  Copyright (c) 1995-2012, The University of Sheffield. See the file
+ *  COPYRIGHT.txt in the software or at http://gate.ac.uk/gate/COPYRIGHT.txt
+ *
+ *  This file is part of GATE (see http://gate.ac.uk/), and is free
+ *  software, licenced under the GNU Library General Public License,
+ *  Version 2, June 1991 (in the distribution as file licence.html,
+ *  and also available at http://gate.ac.uk/gate/licence.html).
+ *
+ *  Valentin Tablan 12 July 2002
+ *
+ *  $Id$
+ */
+
+package gate.util;
+
+import gate.*;
+
+/**
+ * This class provides some static utility methods such as equality test for
+ * annotation sets and documents. They are mainly used by test classes.
+ */
+public class TestEqual {
+  /**
+   * Checks two documents for equality.
+   * @param doc1 a document
+   * @param doc2 another document
+   * @return a boolean.
+   */
+  public static boolean documentsEqual(Document doc1, Document doc2){
+    message = "";
+    if(doc1 == null ^ doc2 == null){
+      message = "Documents not equal: null<>non-null!";
+      return false;
+    }
+    if(doc1 == null) return true;
+    if(! check(doc1.getContent(), doc2.getContent())){
+      message = "Document contents different!";
+      return false;
+    }
+
+    if(! check(doc1.getAnnotations(), doc2.getAnnotations())){
+      message = "Documents default AS not equal!";
+      return false;
+    }
+
+    if(doc1 instanceof TextualDocument){
+      if(doc2 instanceof TextualDocument){
+        if(! check(((TextualDocument)doc1).getEncoding(),
+                   ((TextualDocument)doc2).getEncoding())){
+          message = "Textual documents with different encodings!";
+          return false;
+        }
+      }else{
+        message = "Documents not equal: textual<>non-textual!";
+        return false;
+      }
+    }
+    if(! check(doc1.getFeatures(), doc2.getFeatures())){
+      message = "Documents features not equal!";
+      return false;
+    }
+
+//needs friend declaration :(
+//    if(!markupAware.equals(doc.markupAware)) return false;
+
+    if(! check(doc1.getNamedAnnotationSets(),
+               doc2.getNamedAnnotationSets())){
+      message = "Documents named annots not equal!";
+      return false;
+    }
+
+//    if(doc1 instanceof DocumentImpl){
+//      if(doc2 instanceof DocumentImpl){
+//        if(! check(((DocumentImpl)doc1).getNextNodeId(),
+//                   ((DocumentImpl)doc2).getNextNodeId())){
+//          message = "Documents next nodeID not equal!";
+//          return false;
+//        }
+//        if(! check(((DocumentImpl)doc1).getNextAnnotationId(),
+//                   ((DocumentImpl)doc2).getNextAnnotationId())){
+//          message = "Documents next annotationIDs not equal!";
+//          return false;
+//        }
+//      }else{
+//        message = "Documents not equal: DocumentImpl<>non-DocumentImpl!";
+//        return false;
+//      }
+//    }
+
+    if(! check(doc1.getSourceUrl(), doc2.getSourceUrl())){
+      message = "Documents sourceURLs not equal!";
+      return false;
+    }
+    if(! (check(doc1.getSourceUrlStartOffset(),
+               doc2.getSourceUrlStartOffset())
+         &&
+         check(doc1.getSourceUrlEndOffset(),
+               doc2.getSourceUrlEndOffset()))){
+      message = "Documents sourceURLOffsets not equal!";
+      return false;
+    }
+    return true;
+  }
+
+  /** Two AnnotationSet are equal if their name, the documents of which belong
+    *  to the AnnotationSets and annotations from the sets are the same
+    */
+  public static boolean annotationSetsEqual(AnnotationSet as1,
+                                            AnnotationSet as2) {
+    if(as1 == null ^ as2 == null) return false;
+    if(as1 == null) return true;
+    //Sets equality
+    if(as1.size() != as2.size()) return false;
+    try{
+      if(! as1.containsAll(as2)) return false;
+    }catch(ClassCastException unused)   {
+      return false;
+    }catch(NullPointerException unused) {
+      return false;
+    }
+
+//removed to prevent infinite looping in testDocumentsEqual()
+//    // verify the documents which they belong to
+//    if (! check (as1.getDocument(), as2.getDocument())) return false;
+
+    // verify the name of the AnnotationSets
+    if (! check(as1.getName(), as2.getName())) return false;
+    return true;
+  } // equals
+
+
+
+
+  /** Check: test 2 objects for equality */
+  static protected boolean check(Object a, Object b) {
+    if(a == null || b == null) return a == b;
+    else return a.equals(b);
+  } // check(a,b)
+
+  /**
+   * If set to true, explanation messages will be printed when a test fails.
+   */
+  public static String message = "";
+}
\ No newline at end of file

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