Branch: refs/heads/master
Home: https://github.com/uzh/gc3pie
Commit: 0105aca9bf4ad12207465e9ef45fa4ce88346e25
https://github.com/uzh/gc3pie/commit/0105aca9bf4ad12207465e9ef45fa4ce88346e25
Author: Riccardo Murri <riccardo.mu...@gmail.com>
Date: 2016-11-14 (Mon, 14 Nov 2016)
Changed paths:
M docs/programmers/tutorials/workflows/TEMPLATE.tex
M docs/programmers/tutorials/workflows/part00.pdf
M docs/programmers/tutorials/workflows/part00.tex
M docs/programmers/tutorials/workflows/part01.tex
M docs/programmers/tutorials/workflows/part02.tex
M docs/programmers/tutorials/workflows/part03.tex
M docs/programmers/tutorials/workflows/part04.tex
M docs/programmers/tutorials/workflows/part05.tex
M docs/programmers/tutorials/workflows/part06.tex
M docs/programmers/tutorials/workflows/part07.tex
M docs/programmers/tutorials/workflows/part08.tex
M docs/programmers/tutorials/workflows/part09.tex
M docs/programmers/tutorials/workflows/part10.tex
Log Message:
-----------
Change date on the slides to Nov. 14--17, 2016
Commit: 3e1a1e9383132fac1cddb553c164941570985705
https://github.com/uzh/gc3pie/commit/3e1a1e9383132fac1cddb553c164941570985705
Author: Riccardo Murri <riccardo.mu...@gmail.com>
Date: 2016-11-14 (Mon, 14 Nov 2016)
Changed paths:
M tox.ini
Log Message:
-----------
tox.ini: Install setuptools >= 21.0.0
Otherwise GC3Pie won't install in the test environment if the
system-provided `setuptools` is earlier than that...
Commit: 1f15b4ea40cac6b345bd9be725764eff15af2443
https://github.com/uzh/gc3pie/commit/1f15b4ea40cac6b345bd9be725764eff15af2443
Author: Riccardo Murri <riccardo.mu...@gmail.com>
Date: 2016-11-14 (Mon, 14 Nov 2016)
Changed paths:
M gc3libs/backends/shellcmd.py
Log Message:
-----------
Restore meaning of `Application.requested_walltime==None` as
"unlimited/unspecified duration".
Also get rid of errors arising from comparing a null
`requested_walltime` to a duration value.
Commit: 15d73d4dc92d8028f7965902da61cadebd28ba4f
https://github.com/uzh/gc3pie/commit/15d73d4dc92d8028f7965902da61cadebd28ba4f
Author: Riccardo Murri <riccardo.mu...@gmail.com>
Date: 2016-11-14 (Mon, 14 Nov 2016)
Changed paths:
A docs/programmers/tutorials/workflows/downloads/topblast/short1.faa
A docs/programmers/tutorials/workflows/downloads/topblast/short2.faa
A docs/programmers/tutorials/workflows/downloads/topblast/short3.faa
M docs/programmers/tutorials/workflows/part04.pdf
M docs/programmers/tutorials/workflows/part04.tex
Log Message:
-----------
Revise workflow tutorial part 04, and add shorter FAA files for the BLAST
example.
Commit: fb74408478eb6586b008a242325b3fba86e4304d
https://github.com/uzh/gc3pie/commit/fb74408478eb6586b008a242325b3fba86e4304d
Author: Riccardo Murri <riccardo.mu...@gmail.com>
Date: 2016-11-14 (Mon, 14 Nov 2016)
Changed paths:
M docs/programmers/tutorials/workflows/part00.pdf
M docs/programmers/tutorials/workflows/part00.tex
M docs/programmers/tutorials/workflows/part05.pdf
M docs/programmers/tutorials/workflows/part05.tex
M docs/programmers/tutorials/workflows/part06.pdf
M docs/programmers/tutorials/workflows/part06.tex
M docs/programmers/tutorials/workflows/part07.pdf
M docs/programmers/tutorials/workflows/part08.pdf
M docs/programmers/tutorials/workflows/part09.pdf
M docs/programmers/tutorials/workflows/part09.tex
M docs/programmers/tutorials/workflows/part10.pdf
Log Message:
-----------
"workflow" tutorial: misc small changes.
Commit: 84ce53241cab7dfd65807ca5ec8e2eecf93c4978
https://github.com/uzh/gc3pie/commit/84ce53241cab7dfd65807ca5ec8e2eecf93c4978
Author: Riccardo Murri <riccardo.mu...@gmail.com>
Date: 2016-11-14 (Mon, 14 Nov 2016)
Changed paths:
M docs/programmers/tutorials/workflows/part02.pdf
M docs/programmers/tutorials/workflows/part02.tex
Log Message:
-----------
Add slide on option `-r`/`--resource` to part 02.
Commit: a8156442e76069d6596cc34d7bc06c1667df2836
https://github.com/uzh/gc3pie/commit/a8156442e76069d6596cc34d7bc06c1667df2836
Author: Riccardo Murri <riccardo.mu...@gmail.com>
Date: 2016-11-14 (Mon, 14 Nov 2016)
Changed paths:
M docs/programmers/tutorials/workflows/part03.pdf
M docs/programmers/tutorials/workflows/part03.tex
Log Message:
-----------
Expand part 03 with a longer list of commands.
Commit: 2835637a95e801648cf3a1dcb393875137e103fe
https://github.com/uzh/gc3pie/commit/2835637a95e801648cf3a1dcb393875137e103fe
Author: Riccardo Murri <riccardo.mu...@gmail.com>
Date: 2016-11-14 (Mon, 14 Nov 2016)
Changed paths:
M docs/programmers/tutorials/workflows/solutions/ex4b.py
Log Message:
-----------
Correct solution to Ex. 4.B to with with `blastp` instead of `blastpgp`.
Compare: https://github.com/uzh/gc3pie/compare/d27bdb5355ca...2835637a95e8
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