gschem symbols do not have to have the same number of pins as the footprints you use. Feel free to put a diode in a DIP-40 footprint. The only key is that the pin *numbers* have to match. So, if you have a sot-23 footprint diode that uses pins 1 and 3, you can't use a gschem diode that uses pins 1 and 2. Be careful of anode/cathode matching too.
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