Hello, >From the main gateway page for human, the hg18 data is still available.
Instructions to find data: 1) http://genome.ucsc.edu 2) click on "genomes" 3) [optional] click on the "reset" button to clear old setting that my be interfering. This is optional and will remove any custom tracks not included in a Session 4) default assembly is Human, May 2006 (hg18) 5) scroll up one assembly in that tab to find the Feb 2009 assembly (hg19) We are actively working to add tracks to hg19 (from internal and external sources). If there is a track in hg18 that you have interest in adding to hg19, then perhaps try to lift the hg18 data using liftOver, then add to hg19 as a custom track. The assemblies are similar enough that this should work very well for most cases. We sometimes use liftOver ourselves to re-map data to new genomic versions. Some help: http://genome.ucsc.edu/goldenPath/help/hgTracksHelp.html#Convert http://genome.ucsc.edu/goldenPath/help/hgTracksHelp.html#CustomTracks Hopefully this helps, Jennifer ------------------------------------------------ Jennifer Jackson UCSC Genome Bioinformatics Group ----- "Stegmann Sander (GEN)" <[email protected]> wrote: > From: "Stegmann Sander (GEN)" <[email protected]> > To: "[email protected]" <[email protected]> > Sent: Sunday, August 23, 2009 11:48:46 PM GMT -08:00 US/Canada Pacific > Subject: [Genome] hg18 - hg19 lost track(s)? > > Hi, > > What happened to a lot of the tracks that were available in the USC > Genome Browser (hg18) now that it has gone to hg19? > For example I need the tracks displaying FISH-probes en SNPs form > specific arrays (such as the Affymetrix 500K). Where are these (and > many other) tracks and how can I open them again....? > I sort of depend on you for this kind of accessible data. > > Thanks, > > Sander Stegmann > > > > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
