Hello ZC, To read about the how the 44-way alignments were created, go to the track details page by clicking on the blue track name in the Genome Browser (alternatively, follow this link: http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg18&g=cons44way).
The alignments are in MAF format, which is described here: http://genome.ucsc.edu/FAQ/FAQformat#format5 I hope this information is helpful. If you have further questions, please feel free to contact us again at [email protected]. -- Brooke Rhead UCSC Genome Bioinformatics Group zhuocheng Hou wrote on 9/22/09 5:33 PM: > Hi All, > > Do anyone know how the 44way alignments sequence position generated? For > example, most alignments have indels, and the original sequence position > would change after the alignment. So, what's the position in the 44way > alignment file (wigFix)? > > ZC > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
