Hello, I am hoping to use the protein FASTA to be able to determine conservation across species. I understand that this is based off a genomic alignment for the species listed. So I was wondering whether there has been a comparison for the Protein FASTA amino acid sequence provided by UCSC to the accepted amino acid sequence for each species to determine how accurate this genomic derived sequence is? If you could point me to any publications using the UCSC protein FASTA it would also be appreciated.
Thanks. Jamie Kapplinger Research Technologist I Windland Smith Rice Sudden Death Genomics Laboratory Phone: (507) 538-7321 Fax: (507) 284-3757 E-mail: [email protected] <mailto:[email protected]> ______________________________ Mayo Clinic 505 Guggenheim 200 first Street SW Rochester, MN 55905 _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
