Hi UCSC gurus, the description of the knownGeneMrna given via the web page http://genome.ucsc.edu/cgi-bin/hgTables appears to be wrong, in that the seq field is defined to hold a peptide sequence, whereas the table contains the mRNA (actually cDNA) sequences of the knownGenes. -cheers Peter
Database: hg18 Primary Table: knownGeneMrna Row Count: 66,803 Format description: A predicted peptide - linked to a predicted gene. field example SQL type info description name uc001aaa.2 varchar(255) values Name of gene - same as in genePred seq gcagggctctcttgcttagagtggtgg... longblob Peptide sequence -- Dr. med. Peter Robinson Institut für Medizinische Genetik Charité - Universitätsmedizin Berlin Augustenburger Platz 1 13353 Berlin Germany voice: 49-30-450569124 fax: 49-30-450569915 email: [email protected] http://compbio.charite.de/ http://www.human-phenotype-ontology.org _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
