Reposting to list.
> ------------------------------------------------------------------------ > > *From:* Viel, Kevin > *Sent:* Wednesday, September 30, 2009 2:48 PM > *To:* [email protected] > *Subject:* txstart and start discrepancy > > > > Hello, > > > > I obtained the “Genes and Gene Prediction Tracks” for the Feb. 2009 > Human Genome, which contains these data: > > > > name txstart txend > > CCDS35457.1 154065871 154250827 > > > > > > This record corresponds to F8. If I use the Genome Browser to search > for F8, I find RefSeq: NM_000132.3 with the same CCDS number. However, > the Start and End for this record are 154064070 and 154250998, > respectively. Can anyone explain this discrepancy? I expected these > values to match. This does not seem to be the 0 versus 1 offset > discussed in the FAQ. > > > > > > Thank you, > > > > Kevin > > > > > > > > *Kevin Viel, PhD* > > Senior Research Statistician > > Patient Safety & Quality > > International College of Robotic Surgery > > Saint Joseph's Translational Research Institute > > > > *Saint Joseph**'s Hospital* > > 5671 Peachtree Dunwoody Road, NE, Suite 330 > > Atlanta, GA 30342 > > > > (678) 843-6076: Direct Phone > > (678) 843-6153: Facsimile > > (404) 558-1364: Mobile > > [email protected] <mailto:[email protected]> > > [email protected] <mailto:[email protected]> > > > > > > > > > > > > NOTICE: This e-mail message and all attachments transmitted with it may > contain legally privileged and confidential information intended solely > for the use of the addressee. In addition, this correspondence may > contain private patient information protected under the federal privacy > rule, 45 C.F.R. Parts 160 and 164, and applicable state law. > Unauthorized use or disclosure of this information is strictly > prohibited. If the reader of this message is not the intended recipient, > you are hereby notified that any reading, dissemination, distribution, > copying or other use of this message or its attachments is strictly > prohibited. If you have received this message in error, please notify > the sender immediately by return e-mail or at the telephone number above > and delete the original message and all copies and backups thereof. > Thank you > > > > > > Confidentiality Notice: > This email, including any attachments is the > property of Catholic Health East and is intended > for the sole use of the intended recipient(s). > It may contain information that is privileged and > confidential. Any unauthorized review, use, > disclosure, or distribution is prohibited. If you are > not the intended recipient, please reply to the > sender that you have received the message in > error, then delete this message. _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
