Hey Mark, I suspect, though have been unable to confirm, that this error has been corrected in the most recent version of the bedItemOverlapCount source (v. 1.19). If you could grab this from our archive, and test this in your environment we'd be appreciative. Let me know what you find. Sorry about this, one of our programmers (me ;-) got a little too aggressive with optimizing.
I assume you already know how to grab the source, but if not, there are instructions here: http://genomewiki.ucsc.edu/index.php/CVS_kent_source_tree_control Brian On Fri, Oct 30, 2009 at 10:15 AM, Strivens, Mark Andrew < [email protected]> wrote: > > I am getting an error > > > bedItemOverlapCount.c:164: error: cast from pointer to integer of > > > different size > > > > > > Any ideas? > > > Thanks for your great work! > > > > > > Ivan > > > PS: I am using Ubuntu 9.04 server > > > > I am getting the same error message compiling the utils on an OpenSuse > 11.0 machine - could this be a GCC problem? > > > > OpenSuse 11.0 (x86_64) > > gcc version 4.3.1 20080507 (prerelease) [gcc-4_3-branch revision 135036] > (SUSE Linux) > > > > I also get numerous prototyping errors... > > > > Thanks > > > > Mark Strivens > > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome > _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
