Thanks Pauline, Do you know when the current QC process will be finished?
You all have the best and seems most comprehensive annotated set of alternate exons/transcripts in that file. Thanks Again, Ian On Thu, 29 Oct 2009, Pauline Fujita wrote: > Hello Ian, > > The hg19 version of this track is currently undergoing quality assurance > review and therefore we have not released it to our public site. The track is > available on our test site but as it is under review, it may contain errors. > Also, the download file you mention will not be available until the track is > released to our public site so you will have to download the data you want > from the table browser on our test site: > > http://genome-test.cse.ucsc.edu/cgi-bin/hgTables > > After selecting hg19 select: > > group: Genes and Gene Prediction Tracks > track: UCSC Genes > table: knownGene > > You can then choose to output the data as a gzip compressed file. Hopefully > this information was helpful and answers your question. If you have further > questions or require clarification feel free to contact the mailing list at > [email protected]. > > Best regards, > > Pauline Fujita > > UCSC Genome Bioinformatics Group > http://genome.ucsc.edu > > > > [email protected] wrote: >> Hi, >> >> I am looking for >> >> knownGene.txt.gz >> >> in >> >> http://hgdownload.cse.ucsc.edu/goldenPath/hg19/database/ >> >> it exists here >> >> http://hgdownload.cse.ucsc.edu/goldenPath/hg18/database/knownGene.txt.gz >> >> But I need the new hg19 version, is it just not prepared yet? If so, would >> you know a ETA? >> >> Best Thanks! ~i >> >> >> Ian Byrell Stanaway >> Nickerson/Rieder Lab >> Genome Sciences >> University of Washington >> Seattle, WA >> >> >> >> _______________________________________________ >> Genome maillist - [email protected] >> https://lists.soe.ucsc.edu/mailman/listinfo/genome >> > > Ian Byrell Stanaway Nickerson/Rieder Lab Genome Sciences University of Washington Seattle, WA _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
