The /gbdb files cannot be accessed? Good to know. I rarely use it - I should more. Dev is just so much faster. Jen
------------------------------------------------ Jennifer Jackson UCSC Genome Bioinformatics Group ----- "Hiram Clawson" <[email protected]> wrote: > From: "Hiram Clawson" <[email protected]> > To: "Chris K. Fuller" <[email protected]> > Cc: [email protected] > Sent: Thursday, December 17, 2009 5:25:47 PM GMT -08:00 US/Canada Pacific > Subject: Re: [Genome] Heavy Usage? > > Good Evening Chris: > > If you are looking for DNA sequence as your result, you > aren't going to find it in the SQL database. > > You could certainly generate locations that you want sequence > for from the SQL database. Then place those coordinates > in a custom track and have the table browser deliver the > actual sequence to you. > > --Hiram > > Chris K. Fuller wrote: > > Hello UCSC, > > > > Could you provide more guidance on what constitutes "heavy usage" > of > > the SQL database? I'm writing code that will grab 10kb promoter > > sequences based on a lists genes (probably 100 at a time). I'm > just > > learning SQL, and I don't have much basis for comparison. How will > I > > know if I'm slowing down the system, aside from being booted off!! > > > > Thanks for you assistance, > > > > Chris > > _______________________________________________ > > Genome maillist - [email protected] > > https://lists.soe.ucsc.edu/mailman/listinfo/genome > > > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
