On 12/28/09 3:08 PM, Hiram Clawson wrote: > > Instructions: http://genome.ucsc.edu/admin/jk-install.html > and more extensively in the source tree: > src/product/README.building.source > > I had one little bug in the build of v221 on the mac, > line 51 of src/lib/errCatch.c needed an (int) cast: > > < int pid = pthread_self(); > --- > > int pid = (int)pthread_self();
Hi Hiram, I am trying to compile from source, but it turns out for my Mac Pro that I do not have mySQL in either /usr/include or /usr/local. Do we really need mySQL in order to compile the source? I just need binaries relating to bigBed/bigWig formats, not all the binaries, so is there any way of doing that? Thanks, D. > > --Hiram > > Duke wrote: >> On 12/28/09 1:07 PM, Hiram Clawson wrote: >>> Good Morning Duke: >>> >>> Please try this set of binaries: >>> >>> http://genome-test.cse.ucsc.edu/admin/exe/macOSX.i386/ >>> >>> These are from the version 221 source tree. >> >> Thanks Hiram, I will give it a try. By the way, do you know how and >> where I can download the sources of bedTobigBed for Mac? >> >> Thanks, >> >> D. >> >>> >>> -Hiram >>> >>> Duke wrote: >>>> Hi, >>>> >>>> I am testing bigBed format, and I am working with a Mac Pro. Is >>>> there anyway that I can try bedTobigBed on my Mac Pro? The >>>> executable file on the web >>>> (http://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/) is for >>>> linux 64 bit only. I tried to compile the source, but it did work >>>> either. >>>> >>>> Anybody can shed a light? >>>> >>>> Thanks, >>>> >>>> D. >>> >> >> > _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
