Hello Peng, For this case, the advice is to run BLAT locally. http://genome.ucsc.edu/FAQ/FAQblat
Jennifer ------------------------------------------------ Jennifer Jackson UCSC Genome Bioinformatics Group ----- "Peng Yu" <[email protected]> wrote: > From: "Peng Yu" <[email protected]> > To: [email protected] > Sent: Sunday, January 24, 2010 8:04:58 AM GMT -08:00 US/Canada Pacific > Subject: [Genome] blat on archived genomes > > According to http://genome-archive.cse.ucsc.edu/, no blat is > supported > for the archived genomes. Could somebody let me know if there are any > other website so that I can easily blat a sequence say in mm5 and > mm6? > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
