Hi Jerry, Yes, the UCSC Genes track contains this data. Using the Table browser to see the data model, (use the describe scheme button).
Starting with the primary table "knownGene", examine the table "knownCanonical". http://genome.ucsc.edu/goldenPath/help/hgTracksHelp.html#TableBrowser http://genome.ucsc.edu/FAQ/FAQdownloads#download1 We hope this helps, Jennifer Jackson ------------------------------------------------ Jennifer Jackson UCSC Genome Bioinformatics Group ----- "Jerry Tang" <[email protected]> wrote: > From: "Jerry Tang" <[email protected]> > To: [email protected] > Sent: Friday, January 29, 2010 11:50:51 AM GMT -08:00 US/Canada Pacific > Subject: [Genome] canonical transcript > > Does UCSC have a concept of canonical transcripts, that is, there is > one > representative transcript for each gene? > > Thanks in advance, Jerry > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
