Hello, For sacCer2, the information is in the SGD Genes track. The table with these two datapoints is called sgdToName.
You an either use the Table browser to extract the entire file (or filter on a list identifiers) or obtain using ftp/rsync to the Downloads server. Using the table browser, you could also link in more information from the track's tables (use the "view schema" button and output format "selected fields from primary and relate tables). Basic path for Table browser: 1) start here http://genome.ucsc.edu/cgi-bin/hgTables 2) navigate to assembly and track SGD Genes 3) change table in pull-down menu to be sgdToName 4) confirm that region is "genome" 5) [optional: filter by a set of identifiers] 6). output results. just the table or other linked in data from the track Table browser help doc: http://genome.ucsc.edu/goldenPath/help/hgTablesHelp.html Download FAQ (includes instructions for direct ftp/rsync of data): http://genome.ucsc.edu/FAQ/FAQdownloads.html#download1 http://hgdownload.cse.ucsc.edu/downloads.html -> S. cerevisiae -> Annotation database -> http://hgdownload.cse.ucsc.edu/goldenPath/sacCer2/database/<files named same as tables in Table browser with .txt.gz for data and .sql for schema> We hope this helps, Jennifer ------------------------------------------------ Jennifer Jackson UCSC Genome Bioinformatics Group ----- "Yuan Jian" <[email protected]> wrote: > From: "Yuan Jian" <[email protected]> > To: [email protected] > Sent: Tuesday, February 2, 2010 9:59:53 PM GMT -08:00 US/Canada Pacific > Subject: [Genome] gene symbol and locus tag > > Hello, > > what table should I download from to find gene symbol by given Locus > tag? > > I am using yeast Saccharomyces cerevisiae > for example: > Locus Tag gene Symbol > YKL113C RAD27 > .... > > thanks > > YU > > > > __________________________________________________________________________________ > Yahoo!7: Catch-up on your favourite Channel 7 TV shows easily, > legally, and for free at PLUS7. www.tv.yahoo.com.au/plus7 > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
