Hello, A better way to obtain the entire file is to use the Downloads server and rsync/ftp.
File/instructions can be found here on Downloads server: (downloading through a browser will also fail on large files) - http://hgdownload.cse.ucsc.edu -> - Human link -> - scroll to hg18 -> - Annotation database link -> http://hgdownload.cse.ucsc.edu/goldenPath/hg18/database/ Location on hgdownload goldenPath/hg18/database/pgVenter.txt.gz Jennifer --------------------------------- Jennifer Jackson UCSC Genome Bioinformatics Group http://genome.ucsc.edu/ On 2/9/10 8:28 AM, Ousmane Diallo wrote: > Hello, > I'm trying to download data from the table Venter (pgVenter). I use the > default parameter, > but I choose *genome* for the region and I get the output in a text file > that I specify. > The problem is that I only get a small part of the data, when I open > the file It seem's like I only receive > variants in chromosome 1. But when I download chromosome by chromosome, > I receive all the data. > My question is: is it possible to download at one time the hole Venter > (pgVenter) table that include all variants in > all chromoses? > > Thanks > _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
