Hello, Data in wiggle WIG format, can be colored differently with color/altColor, but for full control over color per data point, try using BED format and the itemRgb attribute.
WIG http://genome.ucsc.edu/goldenPath/help/wiggle.html http://genome.ucsc.edu/goldenPath/help/hgWiggleTrackHelp.html BED http://genome.ucsc.edu/FAQ/FAQformat.html#format1 Comparison of alternative graphing types: http://genomewiki.ucsc.edu/index.php/Selecting_a_graphing_track_data_format Jennifer --------------------------------- Jennifer Jackson UCSC Genome Bioinformatics Group http://genome.ucsc.edu/ On 3/4/10 9:12 AM, Alper Kucukural wrote: > Hello, > I have a question about showing some regions with different colors in > wiggle or any other format. > More detailed, I clustered the peaks in the data and select the > significant ones by comparing with control data. > Is it possible to show these significant peaks with different colors? > Thanks, > > Alper Kucukural, Ph.D. > Moore Lab > Biochemistry and Molecular Pharmacology Dept. > Lazare Medical Research Building, 870P > UMass Medical School > 364 Plantation St. > Worcester, MA 01605-4321 > Lab: 508-856-2838 > Cell: 785-393-8228 > > > > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
