Hi Bryan, The best way to view the vertebrate nets/chains is to view them in the human genome browser: http://genome.ucsc.edu/cgi-bin/hgGateway
Here is a link to the document to help you get started: http://genome.ucsc.edu/goldenPath/help/hgTracksHelp.html#GetStarted Once you have selected the human browser and clicked submit from the gateway page it will take you to that specific browser. There is a "Vertebrate Chain/Net" track listed under the "Comparative Genomics" section below the browser image. Click on the "Vertebrate Chain/Net" link to find out more information on this track and to set up which subtracks you would like to view. Please don't hesitate to contact us if you have further questions. Vanessa Kirkup Swing UCSC Genome Bioinformatics Group ----- Original Message ----- From: "Bryan White" <[email protected]> To: [email protected] Sent: Tuesday, March 16, 2010 2:08:15 PM GMT -08:00 US/Canada Pacific Subject: [Genome] .net and .chain files Hello, I am currently trying to view the Human to other Vertebrate genome comparisons listed here http://hgdownload.cse.ucsc.edu/downloads.html#human and I am wondering what is the best way to view these .net and/or .chain files. Thanks, Bryan _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
