Hi,
I encountered a incorrect exon frame in NM_020407 (RHBG). It is correct in the Genome Browser, but when I get the data from hgTables I get following information: #bin name chrom strand txStart txEnd cdsStart cdsEnd exonCount exonStarts exonEnds id name2 cdsStartStat cdsEndStat exonFrames 1764 NM_020407 chr1 + 154605626 154621633 154605664 154621261 10 154605626,154613715,154614404,154614666,154617761,154618220,154618482,15 4619162,154620941,154621192, 154605851,154613902,154614555,154614814,154617928,154618358,154618616,15 4619284,154621016,154621633, 0 RHBG cmpl cmpl 0,1,2,0,1,0,0,2,1,0, Exon 10 (colored in red) should have an exon frame of '1', but in the output it says '0'. I'm using these data to translate the genes. Is there a list of genes where people have encountered these problems before or will there be an update where these kind of errors are fixed? Sincerely, Gwen Weustink Radboud University Nijmegen Medical Centre Het UMC St Radboud staat geregistreerd bij de Kamer van Koophandel in het handelsregister onder nummer 41055629. The Radboud University Nijmegen Medical Centre is listed in the Commercial Register of the Chamber of Commerce under file number 41055629. _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
