Load your hg18 database with your wiggle table. What is the database 'pol2' to
be used for ?
Please note information about using tables in a local instance of the genome
browser
in the source tree: src/product/README.trackDb
See also, the information about using bigWig files for your wiggle data instead
of the wiggle .wig and .wib files. Track type 18. bigWig in:
src/hg/makeDb/trackDb/README
--Hiram
Tiandao Li wrote:
> Hi,
>
> We installed a minimal genome browser locally with hg18 only. We want to
> load generated wig files (human hg18) so we can view them on local browser.
> We used wigEncode to generate wig and wib files.
>
> peak$ wigEncode PolII_eland_sorted2.wig PolII.wig PolII.wib
> Converted PolII_eland_sorted2.wig, upper limit 4385.00, lower limit 2.00
>
> then
> mysql> create database pol2;
>
> copy system-wide hg.conf to my folder as .hg.conf
>
> ~]$ /opt/kent/hgLoadWiggle pol2 xxx PolII.wig
>
> Can't start query:
> select * from chromInfo
>
> mySQL error 1146: Table 'pol2.chromInfo' doesn't exist
>
> Please show me how to load wig files to local mysql database.
>
> Thanks!!!
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