Hello Carlo, The axtChain program is in the kent source tree: /kent/src/hg/mouseStuff/axtChain
You can download it here: http://hgdownload.cse.ucsc.edu/downloads.html#source_downloads You can read about the liftOver process here: http://genomewiki.cse.ucsc.edu/index.php/Minimal_Steps_For_LiftOver I hope this clears things up for you. Please feel welcome to contact us again with further inquiries. Antonio Coelho UCSC Genome Bioinformatics Group Carlo Artieri wrote: > Hi. I can't seem to find the location where I can obtain a copy of the > AxtChain program. I'm trying to generate a custom LiftOver table of two > genomic alignments, and need to generate a chain file. Any help would be > appreciated! > > Thanks, > > Carlo > > _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
